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Chloroplast simple sequence repeat markers for evolutionary studies in the sexually deceptive orchid genus Chiloglottis

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dc.contributor.authorEbert, Daniel
dc.contributor.authorHayes, Christine
dc.contributor.authorPeakall, Rodney
dc.date.accessioned2015-12-10T22:44:18Z
dc.date.issued2009
dc.date.updated2016-02-24T12:05:45Z
dc.description.abstractThe orchids in the genus Chiloglottis are pollinated exclusively by sexual deception. Extensive sequencing (> 19.5 kb) of noncoding chloroplast DNA revealed that simple sequence repeats (cpSSRs) were abundant, enabling a set of 41 cpSSR markers to be developed. All markers were polymorphic across the genus. Polymorphism reflected variation at both mononucleotide repeats and indels. For a subset of four taxa with 40 samples each, locus polymorphism varied from 46 to 81%, while the number of haplotypes ranged from seven to 21 per taxon. Extensive differentiation among the taxa was detected. These cpSSRs markers will enable novel insights into the evolution of this unique genus.
dc.identifier.issn1755-098X
dc.identifier.urihttp://hdl.handle.net/1885/58541
dc.publisherWiley-Blackwell
dc.sourceMolecular Ecology Resources
dc.subjectKeywords: Chiloglottis; Orchidaceae Chiloglottis; Chloroplast microsatellite; Chloroplast simple sequence repeat; CpSSR; Orchidaceae; Sexual deception
dc.titleChloroplast simple sequence repeat markers for evolutionary studies in the sexually deceptive orchid genus Chiloglottis
dc.typeJournal article
local.bibliographicCitation.lastpage789
local.bibliographicCitation.startpage784
local.contributor.affiliationEbert, Daniel, College of Medicine, Biology and Environment, ANU
local.contributor.affiliationHayes, Christine, College of Medicine, Biology and Environment, ANU
local.contributor.affiliationPeakall, Rodney, College of Medicine, Biology and Environment, ANU
local.contributor.authoruidEbert, Daniel, u9507474
local.contributor.authoruidHayes, Christine, u8200673
local.contributor.authoruidPeakall, Rodney, u9306248
local.description.embargo2037-12-31
local.description.notesImported from ARIES
local.identifier.absfor060411 - Population, Ecological and Evolutionary Genetics
local.identifier.absfor060299 - Ecology not elsewhere classified
local.identifier.ariespublicationu9511635xPUB446
local.identifier.citationvolume9
local.identifier.doi10.1111/j.1755-0998.2008.02321.x
local.identifier.scopusID2-s2.0-65249147189
local.identifier.thomsonID000265897200019
local.type.statusPublished Version

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