The first genetic map for a psoraleoid legume (Bituminaria bituminosa) reveals highly conserved synteny with phaseoloid legumes
| dc.contributor.author | Nelson, Matthew | |
| dc.contributor.author | Jabbari, Jafar | |
| dc.contributor.author | Turakulov, Rustamzhon | |
| dc.contributor.author | Pradhan, Aneeta | |
| dc.contributor.author | Pazos-Navarro, Maria | |
| dc.contributor.author | Stai, Jacob | |
| dc.contributor.author | Cannon, Steven | |
| dc.contributor.author | Real, Daniel | |
| dc.date.accessioned | 2022-03-03T03:31:12Z | |
| dc.date.available | 2022-03-03T03:31:12Z | |
| dc.date.issued | 2020 | |
| dc.date.updated | 2020-12-20T07:21:01Z | |
| dc.description.abstract | We present the first genetic map of tedera (Bituminaria bituminosa (L.) C.H. Stirton), a drought-tolerant forage legume from the Canary Islands with useful pharmaceutical properties. It is also the first genetic map for any species in the tribe Psoraleeae (Fabaceae). The map comprises 2042 genotyping-by-sequencing (GBS) markers distributed across 10 linkage groups, consistent with the haploid chromosome count for this species (n = 10). Sequence tags from the markers were used to find homologous matches in the genome sequences of the closely related species in the Phaseoleae tribe: soybean, common bean, and cowpea. No tedera linkage groups align in their entirety to chromosomes in any of these phaseoloid species, but there are long stretches of collinearity that could be used in tedera research for gene discovery purposes using the better-resourced phaseoloid species. Using Ks analysis of a tedera transcriptome against five legume genomes provides an estimated divergence time of 17.4 million years between tedera and soybean. Genomic information and resources developed here will be invaluable for breeding tedera varieties for forage and pharmaceutical purposes. | en_AU |
| dc.description.sponsorship | This research was funded by the Future Farm Industries Cooperative Research Centre (FFI CRC), Department of Primary industries and Regional development (DPIRD) and Meat & Livestock Australia (MLA). This research was supported in part by the US Department of Agriculture, Agricultural Research Service, project 5030-21000-069-00D. Mention of trade names or commercial products in this publication is solely for the purpose of providing specific information and does not imply recommendation or endorsement by the U.S. Department of Agriculture. USDA is an equal opportunity provider and Employer. AGRF is supported by the Australian Government NCRIS initiative through Bioplatforms Australia. | en_AU |
| dc.format.mimetype | application/pdf | en_AU |
| dc.identifier.issn | 2223-7747 | en_AU |
| dc.identifier.uri | http://hdl.handle.net/1885/261638 | |
| dc.language.iso | en_AU | en_AU |
| dc.provenance | This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/). | en_AU |
| dc.publisher | M D P I AG | en_AU |
| dc.rights | © 2020 The Authors | en_AU |
| dc.rights.license | Creative Commons Attribution licence | en_AU |
| dc.rights.uri | https://creativecommons.org/licenses/by/4.0/ | en_AU |
| dc.source | Plants | en_AU |
| dc.subject | legume genome evolution | en_AU |
| dc.subject | Phaseoleae | en_AU |
| dc.subject | Psoraleeae | en_AU |
| dc.subject | Ks analysis | en_AU |
| dc.subject | linkage mapping | en_AU |
| dc.subject | perennial forage legume | en_AU |
| dc.subject | tedera | en_AU |
| dc.title | The first genetic map for a psoraleoid legume (Bituminaria bituminosa) reveals highly conserved synteny with phaseoloid legumes | en_AU |
| dc.type | Journal article | en_AU |
| dcterms.accessRights | Open Access | en_AU |
| local.bibliographicCitation.issue | 973 | en_AU |
| local.bibliographicCitation.lastpage | 13 | en_AU |
| local.bibliographicCitation.startpage | 1 | en_AU |
| local.contributor.affiliation | Nelson, Matthew, CSIRO Agriculture and food | en_AU |
| local.contributor.affiliation | Jabbari, Jafar, Victorian Comprehensive Cancer Centre | en_AU |
| local.contributor.affiliation | Turakulov, Rustamzhon, College of Science, ANU | en_AU |
| local.contributor.affiliation | Pradhan, Aneeta, University of Western Australia | en_AU |
| local.contributor.affiliation | Pazos-Navarro, Maria, University of Western Australia | en_AU |
| local.contributor.affiliation | Stai, Jacob, Iowa State University | en_AU |
| local.contributor.affiliation | Cannon, Steven, Corn Insects and Crop Genetics Research Unit | en_AU |
| local.contributor.affiliation | Real, Daniel, Department of Primary Industries and Regional Development | en_AU |
| local.contributor.authoruid | Turakulov, Rustamzhon, u4035818 | en_AU |
| local.description.notes | Imported from ARIES | en_AU |
| local.identifier.absfor | 060309 - Phylogeny and Comparative Analysis | en_AU |
| local.identifier.absfor | 060411 - Population, Ecological and Evolutionary Genetics | en_AU |
| local.identifier.absseo | 860899 - Human Pharmaceutical Products not elsewhere classified | en_AU |
| local.identifier.absseo | 830499 - Pasture, Browse and Fodder Crops not elsewhere classified | en_AU |
| local.identifier.ariespublication | a383154xPUB14866 | en_AU |
| local.identifier.citationvolume | 9 | en_AU |
| local.identifier.doi | 10.3390/plants9080973 | en_AU |
| local.publisher.url | https://www.mdpi.com/ | en_AU |
| local.type.status | Published Version | en_AU |
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