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The nano- and meso-scale structure of amorphous calcium carbonate

dc.contributor.authorClark, Simon
dc.contributor.authorColas, Bruno
dc.contributor.authorJacob, Dorrit
dc.contributor.authorNeuefeind, Joerg C.
dc.contributor.authorWang, Hsiu-Wen
dc.contributor.authorPage, Katherine L.
dc.contributor.authorSoper, A. K.
dc.contributor.authorSchodder, Philipp I.
dc.contributor.authorDuchstein, Patrick
dc.contributor.authorApeleo Zubiri, Benjamin
dc.contributor.authorYokosawa, Tadahiro
dc.date.accessioned2026-01-27T00:17:16Z
dc.date.available2026-01-27T00:17:16Z
dc.date.issued2022-04-27
dc.date.updated2023-10-22T07:16:27Z
dc.description.abstractUnderstanding the underlying processes of biomineralization is crucial to a range of disciplines allowing us to quantify the effects of climate change on marine organisms, decipher the details of paleoclimate records and advance the development of biomimetic materials. Many biological minerals form via intermediate amorphous phases, which are hard to characterize due to their transient nature and a lack of long-range order. Here, using Monte Carlo simulations constrained by X-ray and neutron scattering data together with model building, we demonstrate a method for determining the structure of these intermediates with a study of amorphous calcium carbonate (ACC) which is a precursor in the bio-formation of crystalline calcium carbonates. We find that ACC consists of highly ordered anhydrous nano-domains of approx. 2 nm that can be described as nanocrystalline. These nano-domains are held together by an interstitial net-like matrix of water molecules which generate, on the mesoscale, a heterogeneous and gel-like structure of ACC. We probed the structural stability and dynamics of our model on the nanosecond timescale by molecular dynamics simulations. These simulations revealed a gel-like and glassy nature of ACC due to the water molecules and carbonate ions in the interstitial matrix featuring pronounced orientational and translational flexibility. This allows for viscous mobility with diffusion constants four to five orders of magnitude lower than those observed in solutions. Small and ultra-small angle neutron scattering indicates a hierarchically-ordered organization of ACC across length scales that allow us, based on our nano-domain model, to build a comprehensive picture of ACC formation by cluster assembly from solution. This contribution provides a new atomic-scale understanding of ACC and provides a framework for the general exploration of biomineralization and biomimetic processes.
dc.description.sponsorshipBC was supported by a PhD scholarship provided jointly by the Australian Centre for Neutron Scattering, ANSTO and Macquarie University. HWW, KP and JN were supported by the US Department of Energy (DOE), Office of Science (SC), Office of Basic Energy Sciences (BES), Chemical Sciences, Geosciences, and Biosciences Division. KP was supported in part by the DOE, SC, BES Early Career Research Program (KC040602), under contract number DE-AC05-00OR22725. The NOMAD instrument at ORNL’s SNS is sponsored by the DOE, SC, BES, Scientific User Facilities Division. 11-ID-B was supported by the DOE, SC, BES, under Contract No. DE-AC02-06CH11357. SEW acknowledges financial support by an Emmy Noether starting Grant issued by the German Research Foundation (DFG, Grant Number 251939425) (WO1712/3-1) and by a BayIntAn grant issued by the Bavarian Research Alliance (FAU_2018_07); SEW also acknowledges the financial support provided by JCNS to perform the neutron scattering measurements at the Heinz Maier-Leibnitz Zentrum (MLZ), Garching, Germany. SEW, BAZ, TY, and ES acknowledge further support from the Cluster of Excellence 315 ‘Engineering of Advanced Materials—Hierarchical Structure Formation for Functional Devices’ funded by the German Research Foundation. This work was supported by ARC Discovery Grant DP210101268.
dc.format.mimetypeapplication/pdfen_AU
dc.identifier.citationClark, S.M., Colas, B., Jacob, D.E. et al. The nano- and meso-scale structure of amorphous calcium carbonate. Sci Rep 12, 6870 (2022). https://doi.org/10.1038/s41598-022-10627-9
dc.identifier.issn2045-2322
dc.identifier.urihttps://hdl.handle.net/1885/733804944
dc.language.isoen_AUen_AU
dc.provenanceThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/.
dc.publisherNature Publishing Group
dc.rights© 2022 The Author(s)
dc.rights.licenseCreative Commons Attribution 4.0 International License
dc.rights.urihttp://creativecommons.org/licenses/by/4.0/
dc.sourceScientific Reports
dc.titleThe nano- and meso-scale structure of amorphous calcium carbonate
dc.typeJournal article
dcterms.accessRightsOpen Access
local.bibliographicCitation.issue1
local.contributor.affiliationClark, Simon, Macquarie University
local.contributor.affiliationColas, Bruno, Macquarie University
local.contributor.affiliationJacob, Dorrit, College of Science, ANU
local.contributor.affiliationNeuefeind, Joerg C., Oak Ridge National Laboratory
local.contributor.affiliationWang, Hsiu-Wen, Oak Ridge National Laboratory
local.contributor.affiliationPage, Katherine L., Oak Ridge National Laboratory
local.contributor.affiliationSoper, A. K., Rutherford Appleton Laboratory
local.contributor.affiliationSchodder, Philipp I., Friedrich-Alexander-University Erlangen-Nuremberg (FAU)
local.contributor.affiliationDuchstein, Patrick, Friedrich-Alexander-University Erlangen-Nuremberg (FAU)
local.contributor.affiliationApeleo Zubiri, Benjamin, Friedrich-Alexander-Universität
local.contributor.affiliationYokosawa, Tadahiro, Friedrich-Alexander-University Erlangen-Nuremberg (FAU)
local.contributor.authoruidJacob, Dorrit, u4961557
local.description.notesImported from ARIES
local.identifier.absfor370505 - Mineralogy and crystallography
local.identifier.absfor370501 - Biomineralisation
local.identifier.absseo280107 - Expanding knowledge in the earth sciences
local.identifier.ariespublicationa383154xPUB29848
local.identifier.citationvolume12
local.identifier.doi10.1038/s41598-022-10627-9
local.identifier.scopusID2-s2.0-85128883482
local.type.statusPublished Version
publicationvolume.volumeNumber12

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