A novel quartet-based method for phylogenetic inference

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dc.contributor.authorZhou, B. B.
dc.contributor.authorTarawneh, M.
dc.contributor.authorWang, C.
dc.contributor.authorZomaya, Albert Y.
dc.contributor.authorBrent, Richard
dc.coverage.spatialMinnesota USA
dc.date.accessioned2015-12-08T22:30:31Z
dc.date.createdOctober 19-21 2005
dc.date.issued2005
dc.date.updated2015-12-08T09:29:52Z
dc.description.abstractIn this paper we introduce a new quartet-based method. This method makes use of the Bayes (or quartet) weights of quartets as those used in the quartet puzzling. However, all the weights from the related quartets are accumulated to form a global quartet weight matrix. This matrix provides integrated information and can lead us to recursively merge small sub-trees to larger ones until the final single tree is obtained. The experimental results show that the probability for the correct tree to be among a very small number of trees constructed using our method is very high. These significant results open a new research direction to further investigate more efficient algorithms for phylogenetic inference.
dc.identifier.isbn076952476105
dc.identifier.urihttp://hdl.handle.net/1885/34494
dc.publisherIEEE Computer Society
dc.relation.ispartofseriesIEEE Symposium on Bioinformatics and Bioengineering (BIBE 2005)
dc.sourceProceedings Fifth IEEE Symposium on Bioinformatics and Bioengineering (BIBE05)
dc.source.urihttp://ieeexplore.ieee.org/xpl/mostRecentIssue.jsp?asf_arn=null&asf_iid=null&asf_pun=10365&asf_in=null&asf_rpp=null&asf_iv=null&asf_sp=null&asf_pn=2
dc.subjectKeywords: Algorithms; Information dissemination; Matrix algebra; Nucleic acid sequences; Probability; Trees (mathematics); Phylogenetic inference; Quartet based methods; Computational methods
dc.titleA novel quartet-based method for phylogenetic inference
dc.typeConference paper
local.bibliographicCitation.startpage2
local.contributor.affiliationZhou, B B, University of Sydney
local.contributor.affiliationTarawneh, M, University of Sydney
local.contributor.affiliationWang, C, University of Sydney
local.contributor.affiliationZomaya, Albert Y, University of Sydney
local.contributor.affiliationBrent, Richard, College of Physical and Mathematical Sciences, ANU
local.contributor.authoremailu4241028@anu.edu.au
local.contributor.authoruidBrent, Richard, u4241028
local.description.embargo2037-12-31
local.description.notesImported from ARIES
local.description.refereedYes
local.identifier.absfor010399 - Numerical and Computational Mathematics not elsewhere classified
local.identifier.ariespublicationu9209279xPUB113
local.identifier.doi10.1109/BIBE.2005.7
local.identifier.scopusID2-s2.0-33751161037
local.identifier.uidSubmittedByu9209279
local.type.statusPublished Version

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