P450-mediated dehydrotyrosine formation during WS9326 biosynthesis proceeds via dehydrogenation of a specific acylated dipeptide substrate

Date

2023

Authors

Zhang, Songya
Zhang, Lin
Greule, Anja
Tailhades, Julien
Marschall, Edward
Prasongpholchai, Panward
Leng, Daniel
Zhang, Jingfan
Zhu, Jing
Kaczmarski, Joe Alexander

Journal Title

Journal ISSN

Volume Title

Publisher

Shanghai Institute of Materia Medica

Abstract

WS9326A is a peptide antibiotic containing a highly unusual N-methyl-E-2-3-dehydrotyrosine (NMet-Dht) residue that is incorporated during peptide assembly on a non-ribosomal peptide synthetase (NRPS). The cytochrome P450 encoded by sas16 (P450Sas) has been shown to be essential for the formation of the alkene moiety in NMet-Dht, but the timing and mechanism of the P450Sas-mediated α,β-dehydrogenation of Dht remained unclear. Here, we show that the substrate of P450Sas is the NRPS-associated peptidyl carrier protein (PCP)-bound dipeptide intermediate (Z)-2-pent-1′-enyl-cinnamoyl-Thr-N-Me-Tyr. We demonstrate that P450Sas-mediated incorporation of the double bond follows N-methylation of the Tyr by the N-methyl transferase domain found within the NRPS, and further that P450Sas appears to be specific for substrates containing the (Z)-2-pent-1′-enyl-cinnamoyl group. A crystal structure of P450Sas reveals differences between P450Sas and other P450s involved in the modification of NRPS-associated substrates, including the substitution of the canonical active site alcohol residue with a phenylalanine (F250), which in turn is critical to P450Sas activity and WS9326A biosynthesis. Together, our results suggest that P450Sas catalyses the direct dehydrogenation of the NRPS-bound dipeptide substrate, thus expanding the repertoire of P450 enzymes that can be used to produce biologically active peptides.

Description

Keywords

Cytochrome P450, Non-ribosomal peptide synthetase, Protein crystal structure, Enzyme mechanism, Natural products, Peptide antibiotic

Citation

Source

Acta Pharmacologica Sinica

Type

Journal article

Book Title

Entity type

Access Statement

Open Access

License Rights

Creative Commons AttributionNonCommercial-NoDerivs License

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