Amino acid similarity matrices based on force fields

Date

2001

Authors

Doszt�nyi, Zsuzsanna
Torda, Andrew

Journal Title

Journal ISSN

Volume Title

Publisher

Oxford University Press

Abstract

Motivation: We propose a general method for deriving amino acid substitution matrices from low resolution force fields. Unlike current popular methods, the approach does not rely on evolutionary arguments or alignment of sequences or structures. Instead,

Description

Keywords

Keywords: amino acid; protein; amino acid sequence; amino acid substitution; article; controlled study; energy; mathematical computing; methodology; mutation; philosophy; priority journal; scoring system; sequence analysis; Amino Acid Substitution; Chemistry, Physi

Citation

Source

Bioinformatics

Type

Journal article

Book Title

Entity type

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DOI

Restricted until

2037-12-31