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Predictions of single-nucleotide polymorphism differentiation between two populations in terms of mutual information

dc.contributor.authorDewar, Roderick
dc.contributor.authorSherwin, William
dc.contributor.authorThomas, Emma
dc.contributor.authorHolleley, Clare E.
dc.contributor.authorNichols, Richard A.
dc.date.accessioned2015-12-10T22:14:10Z
dc.date.issued2011
dc.date.updated2016-02-24T11:27:05Z
dc.description.abstractMutual information (I) provides a robust measure of genetic differentiation for the purposes of estimating dispersal between populations. At present, however, there is little predictive theory for I. The growing importance in population biology of analyses of single-nucleotide and other single-feature polymorphisms (SFPs) is a potent reason for developing an analytic theory for I with respect to a single locus. This study represents a first step towards such a theory. We present theoretical predictions of I between two populations with respect to a single haploid biallelic locus. Dynamical and steady-state forecasts of I are derived from a Wright-Fisher model with symmetrical mutation between alleles and symmetrical dispersal between populations. Analytical predictions of a simple Taylor approximation to I are in good agreement with numerical simulations of I and with data on I from SFP analyses of dispersal experiments on Drosophila fly populations. The theory presented here also provides a basis for the future inclusion of selection effects and extension to multiallelic loci.
dc.identifier.issn0962-1083
dc.identifier.urihttp://hdl.handle.net/1885/50151
dc.publisherBlackwell Publishing Ltd
dc.sourceMolecular Ecology
dc.subjectKeywords: allele; animal; article; biological model; comparative study; Drosophila melanogaster; genetics; methodology; mutation; population genetics; single nucleotide polymorphism; Alleles; Animals; Drosophila melanogaster; Genetics, Population; Models, Genetic; biodiversity; drift-mutation-dispersal; migration; population genetics; single-nucleotide polymorphism; SNP
dc.titlePredictions of single-nucleotide polymorphism differentiation between two populations in terms of mutual information
dc.typeJournal article
local.bibliographicCitation.lastpage3166
local.bibliographicCitation.startpage3156
local.contributor.affiliationDewar, Roderick, College of Medicine, Biology and Environment, ANU
local.contributor.affiliationSherwin, William, College of Medicine, Biology and Environment, ANU
local.contributor.affiliationThomas, Emma, College of Medicine, Biology and Environment, ANU
local.contributor.affiliationHolleley, Clare E., University of New South Wales
local.contributor.affiliationNichols, Richard A., Queen Mary University of London
local.contributor.authoruidDewar, Roderick, u4620237
local.contributor.authoruidSherwin, William, u4656587
local.contributor.authoruidThomas, Emma, u4530426
local.description.embargo2037-12-31
local.description.notesImported from ARIES
local.identifier.absfor060411 - Population, Ecological and Evolutionary Genetics
local.identifier.absseo970106 - Expanding Knowledge in the Biological Sciences
local.identifier.ariespublicationu4956746xPUB198
local.identifier.citationvolume20
local.identifier.doi10.1111/j.1365-294X.2011.05171.x
local.identifier.scopusID2-s2.0-79960631754
local.identifier.thomsonID000292963100008
local.type.statusPublished Version

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