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Xeml Lab: a tool that supports the design of experiments at a graphical interface and generates computer-readable metadata files, which capture information about genotypes, growth conditions, environmental perturbations and sampling strategy

Hannemann, Jan J; Poorter, Hendrik; Usadel, Bjorn; Blasing, Oliver E; Finck, Alex; Tardieu, Francois; Atkin, Owen; Pons, Thijs; Stitt, Mark; Gibon, Yves

Description

Data mining depends on the ability to access machine-readable metadata that describe genotypes, environmental conditions, and sampling times and strategy. This article presents Xeml Lab. The Xeml Interactive Designer provides an interactive graphical interface at which complex experiments can be designed, and concomitantly generates machine-readable metadata files. It uses a new eXtensible Mark-up Language (XML)-derived dialect termed XEML. Xeml Lab includes a new ontology for environmental...[Show more]

CollectionsANU Research Publications
Date published: 2009
Type: Journal article
URI: http://hdl.handle.net/1885/62627
Source: Plant Cell and Environment
DOI: 10.1111/j.1365-3040.2009.01964.x

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