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Metabolomics Protocols for Filamentous Fungi

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Gummer, Joel; Krill, Christian; Du Fall, Lauren; Waters, Ormonde D.C.; Trengove, Robert; Oliver , Richard P; Solomon, Peter

Description

Proteomics and transcriptomics are established functional genomics tools commonly used to study filamentous fungi. Metabolomics has recently emerged as another option to complement existing techniques and provide detailed information on metabolic regulation and secondary metabolism. Here, we describe broad generic protocols that can be used to undertake metabolomics studies in filamentous fungi.

dc.contributor.authorGummer, Joel
dc.contributor.authorKrill, Christian
dc.contributor.authorDu Fall, Lauren
dc.contributor.authorWaters, Ormonde D.C.
dc.contributor.authorTrengove, Robert
dc.contributor.authorOliver , Richard P
dc.contributor.authorSolomon, Peter
dc.date.accessioned2015-12-10T22:21:37Z
dc.identifier.isbn9781617795008
dc.identifier.urihttp://hdl.handle.net/1885/52296
dc.description.abstractProteomics and transcriptomics are established functional genomics tools commonly used to study filamentous fungi. Metabolomics has recently emerged as another option to complement existing techniques and provide detailed information on metabolic regulation and secondary metabolism. Here, we describe broad generic protocols that can be used to undertake metabolomics studies in filamentous fungi.
dc.publisherHumana Press
dc.relation.ispartofPlant Fungal Pathogens: Methods and Protocols
dc.subjectKeywords: article; fungus; liquid chromatography; mass fragmentography; metabolism; metabolome; metabolomics; methodology; nuclear magnetic resonance; solid phase extraction; systems biology; Chromatography, Liquid; Fungi; Gas Chromatography-Mass Spectrometry; Meta Derivatisation; Fungi; GC-MS; LC-MS; Metabolite; Metabolome; Metabolomics; NMR; SPE; Systems biology
dc.titleMetabolomics Protocols for Filamentous Fungi
dc.typeBook chapter
local.description.notesImported from ARIES
dc.date.issued2012
local.identifier.absfor060101 - Analytical Biochemistry
local.identifier.absfor060505 - Mycology
local.identifier.ariespublicationu4956746xPUB243
local.type.statusPublished Version
local.contributor.affiliationGummer, Joel , Murdoch University
local.contributor.affiliationKrill, Christian , Murdoch University
local.contributor.affiliationDu Fall, Lauren, College of Medicine, Biology and Environment, ANU
local.contributor.affiliationWaters, Ormonde D.C., Curtin University
local.contributor.affiliationTrengove, Robert, Murdoch University
local.contributor.affiliationOliver , Richard P, Curtin University
local.contributor.affiliationSolomon, Peter, College of Medicine, Biology and Environment, ANU
local.description.embargo2037-12-31
local.bibliographicCitation.startpage237
local.bibliographicCitation.lastpage254
local.identifier.doi10.1007/978-1-61779-501-5_15
local.identifier.absseo970106 - Expanding Knowledge in the Biological Sciences
local.identifier.absseo820507 - Wheat
dc.date.updated2016-02-24T11:27:32Z
local.bibliographicCitation.placeofpublicationNew York
local.identifier.scopusID2-s2.0-84855874836
CollectionsANU Research Publications

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