Collet, RemoNordlund, AAsplund, MartinHayek, WTrampedach, Regner2020-04-162020-04-160035-8711http://hdl.handle.net/1885/203219We present an abundance analysis of the low-metallicity benchmark red giant star HD 122563 based on realistic, state-of-the-art, high-resolution, three-dimensional (3D) model stellar atmospheres including non-grey radiative transfer through opacity binning with 4, 12, and 48 bins. The 48-bin 3D simulation reaches temperatures lower by similar to 300-500 K than the corresponding 1D model in the upper atmosphere. Small variations in the opacity binning, adopted line opacities, or chemical mixture can cool the photospheric layers by a further similar to 100-300 K and alter the effective temperature by similar to 100 K. A 3D local thermodynamic equilibrium (LTE) spectroscopic analysis of Fe (I) and Fe (II) lines gives discrepant results in terms of derived Fe abundance, which we ascribe to non-LTE effects and systematic errors on the stellar parameters. We also determine C, N, and 0 abundances by simultaneously fitting CH, OH, NH, and CN molecular bands and lines in the ultraviolet, visible, and infrared. We find a small positive 3D-1D abundance correction for carbon (+0.03 dex) and negative ones for nitrogen (-0.07 dex) and oxygen (-0.34 dex). From the analysis of the [O-I] line at 6300.3 angstrom, we derive a significantly higher oxygen abundance than from molecular lines (+0.46 dex in 3D and +0.15 dex in ID). We rule out important OH photodissociation effects as possible explanation for the discrepancy and note that lowering the surface gravity would reduce the oxygen abundance difference between molecular and atomic indicators.RC acknowledges partial support from the Australian Research Council (ARC) through a Discovery Early Career Researcher Award grant (project DE120102940). Funding for the Stellar Astrophysics Centre is provided by The Danish National Research Foundation (Grant DNRF106). MA gratefully acknowledges funding through ARC Laureate Fellowship FL110100012. RT acknowledges funding from NASA grant NNX15AB24G.application/pdfen-AU© 2018 The Author(s) Published by Oxford University Press on behalf of the Royal Astronomical Society201810.1093/mnras/sty0022019-11-25