Zhang, Xu; Byrnes, Jake K; Gal, Thomas S; Li, Wen-Hsiung; Borevitz, Justin O
Whole genome tiling arrays are a key tool for profiling global genetic and expression variation. In this study we present our methods for detecting transcript level variation, splicing variation and allele specific expression in Arabidopsis thaliana. We also developed a generalized hidden Markov model for profiling transcribed fragment variation de novo. Our study demonstrates that whole genome tiling arrays are a powerful platform for dissecting natural transcriptome variation at...[Show more]
Items in Open Research are protected by copyright, with all rights reserved, unless otherwise indicated.