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A Grass Molecular Identification System for Forensic Botany: A Critical Evaluation of the Strengths and Limitations

Ward, Jodie; Gilmore, Simon; Robertson, James; Peakall, Rodney

Description

Plant material is frequently encountered in criminal investigations but often overlooked as potential evidence. We designed a DNA-based molecular identification system for 100 Australian grasses that consisted of a series of polymerase chain reaction assays that enabled the progressive identification of grasses to different taxonomic levels. The identification system was based on DNA sequence variation at four chloroplast and two mitochondrial loci. Seventeen informative indels and 68...[Show more]

dc.contributor.authorWard, Jodie
dc.contributor.authorGilmore, Simon
dc.contributor.authorRobertson, James
dc.contributor.authorPeakall, Rodney
dc.date.accessioned2015-12-10T22:53:22Z
dc.identifier.issn0022-1198
dc.identifier.urihttp://hdl.handle.net/1885/59323
dc.description.abstractPlant material is frequently encountered in criminal investigations but often overlooked as potential evidence. We designed a DNA-based molecular identification system for 100 Australian grasses that consisted of a series of polymerase chain reaction assays that enabled the progressive identification of grasses to different taxonomic levels. The identification system was based on DNA sequence variation at four chloroplast and two mitochondrial loci. Seventeen informative indels and 68 single-nucleotide polymorphisms were utilized as molecular markers for subfamily to species-level identification. To identify an unknown sample to subfamily level required a minimum of four markers or nine markers for species identification. The accuracy of the system was confirmed by blind tests. We have demonstrated "proof of concept" of a molecular identification system for trace botanical samples. Our evaluation suggests that the adoption of a system that combines this approach with DNA sequencing could assist the morphological identification of grasses found as forensic evidence.
dc.publisherBlackwell Publishing Ltd
dc.sourceJournal of Forensic Sciences
dc.subjectKeywords: molecular marker; plant DNA; accuracy; article; Australia; botany; chloroplast; controlled study; DNA determination; DNA sequence; forensic science; gene locus; grass; indel mutation; mitochondrion; nonhuman; Poaceae; polymerase chain reaction; priority j Chloroplast DNA; Forensic botany; Forensic science; Grasses; Indels; Mitochondrial DNA; Molecular identification system; Polymerase chain reaction; Single nucleotide polymorphisms; Species identification
dc.titleA Grass Molecular Identification System for Forensic Botany: A Critical Evaluation of the Strengths and Limitations
dc.typeJournal article
local.description.notesImported from ARIES
local.identifier.citationvolume54
dc.date.issued2009
local.identifier.absfor060411 - Population, Ecological and Evolutionary Genetics
local.identifier.absfor069901 - Forensic Biology
local.identifier.ariespublicationu9511635xPUB484
local.type.statusPublished Version
local.contributor.affiliationWard, Jodie, College of Medicine, Biology and Environment, ANU
local.contributor.affiliationGilmore, Simon, College of Medicine, Biology and Environment, ANU
local.contributor.affiliationRobertson, James, Australian Federal Police
local.contributor.affiliationPeakall, Rodney, College of Medicine, Biology and Environment, ANU
local.description.embargo2037-12-31
local.bibliographicCitation.issue6
local.bibliographicCitation.startpage1254
local.bibliographicCitation.lastpage1260
local.identifier.doi10.1111/j.1556-4029.2009.01196.x
dc.date.updated2016-02-24T12:06:10Z
local.identifier.scopusID2-s2.0-70350488595
local.identifier.thomsonID000271058400008
CollectionsANU Research Publications

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