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The distribution of short word match counts between Markovian sequences

Burden, Conrad; Leopardi, Paul; Foret, Sylvain


The D2 statistic, which counts the number of word matches between two given sequences, has long been proposed as a measure of similarity for biological sequences. Much of the mathematically rigorous work carried out to date on the properties of the D2 sta

CollectionsANU Research Publications
Date published: 2013
Type: Conference paper
Source: Proceedings of the International Conference on Bioinformatics Models, Methods and Algorithms


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