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Geometry, thermodynamics, and protein

Fang, Yi; Jing, Junmei

Description

We derive a new continuous free energy formula for protein folding. We obtain the formula first by adding hydrophobic effect to a classical free energy formula for cavities in water. We then obtain the same formula by geometrically pursuing the structure

dc.contributor.authorFang, Yi
dc.contributor.authorJing, Junmei
dc.date.accessioned2015-12-08T22:14:46Z
dc.identifier.issn0022-5193
dc.identifier.urihttp://hdl.handle.net/1885/30417
dc.description.abstractWe derive a new continuous free energy formula for protein folding. We obtain the formula first by adding hydrophobic effect to a classical free energy formula for cavities in water. We then obtain the same formula by geometrically pursuing the structure
dc.publisherAcademic Press
dc.sourceJournal of Theoretical Biology
dc.subjectKeywords: globular protein; chemical bonding; enzyme activity; geometry; hydrogen; hydrophobicity; peptide; protein; theoretical study; thermodynamics; article; geometry; hydrogen bond; hydrophobicity; mathematical model; priority journal; protein domain; protein f Area; Constrained minimization; Free energy; Globular protein; Hydrogen bond; Hydrophobic area; Hydrophobic core; Hydrophobic effect; Volume
dc.titleGeometry, thermodynamics, and protein
dc.typeJournal article
local.description.notesImported from ARIES
local.identifier.citationvolume262
dc.date.issued2009
local.identifier.absfor010199 - Pure Mathematics not elsewhere classified
local.identifier.ariespublicationu9209279xPUB73
local.type.statusPublished Version
local.contributor.affiliationFang, Yi, College of Physical and Mathematical Sciences, ANU
local.contributor.affiliationJing, Junmei, College of Physical and Mathematical Sciences, ANU
local.description.embargo2037-12-31
local.bibliographicCitation.issue3
local.bibliographicCitation.startpage383
local.bibliographicCitation.lastpage390
local.identifier.doi10.1016/j.jtbi.2009.09.013
dc.date.updated2016-02-24T11:54:56Z
local.identifier.scopusID2-s2.0-70450255093
CollectionsANU Research Publications

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