Skip navigation
Skip navigation
Open Research will be down for maintenance between 8:00am and 8:15am on Monday, 9th December 2019.

Parallel implementation of a quartet-based algorithm for phylogenetic analysis

Zhou, B B; Chu, D; Tarawmeh, M; Wang, P; Wang, C; Zomaya, Albert Y; Brent, Richard


This paper describes a parallel implementation of our recently developed algorithm for phylogenetic analysis on the IBM BlueGene/L cluster [15]. This algorithm constructs evolutionary trees for a given set of DNA or protein sequences based on the topological information of every possible quartet trees. Our experimental results showed that it has several advantages over many popular algorithms. By distributing the quartet weights evenly across the processing nodes and making effective use of a...[Show more]

CollectionsANU Research Publications
Date published: 2006
Type: Conference paper
Source: Proceedings of International Parallel and Distributed Processing Symposium 2006
DOI: 10.1109/IPDPS.2006.1639534


File Description SizeFormat Image
01_Zhou_Parallel_implementation_of_a_2006.pdf115.08 kBAdobe PDF    Request a copy
02_Zhou_Parallel_implementation_of_a_2006.pdf234.97 kBAdobe PDF    Request a copy

Items in Open Research are protected by copyright, with all rights reserved, unless otherwise indicated.

Updated:  22 January 2019/ Responsible Officer:  University Librarian/ Page Contact:  Library Systems & Web Coordinator