Models and algorithms for haplotype phasing and variant calling
Haplotypes have been increasingly used in genetic studies. Analysis of variations among haplotypes has many applications in population genetics and biomedical research. However, the current DNA sequencing technologies can only read short fragments (called reads) randomly drawn from complete haplotypes, and reads from two haplotypes are mixed together for diploid species like humans. Therefore, recovering the complete haplotype sequences becomes a fundamental problem in computational genomics,...[Show more]
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