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Analyses of corallimorpharian transcriptomes provide new perspectives on the evolution of calcification in the scleractinia (corals)

Lin, Mei-Fang; Moya, A.; Ying, Hua; Chen, Chao Lun Allen; Cooke, Ira; Ball, Eldon; Forêt, Sylvain; Miller, David J.

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Corallimorpharians (coral-like anemones) have a close phylogenetic relationship with scleractinians (hard corals) and can potentially provide novel perspectives on the evolution of biomineralization within the anthozoan subclass Hexacorallia. A survey of the transcriptomes of three representative corallimorpharians led to the identification of homologs of some skeletal organic matrix proteins (SOMPs) previously considered to be restricted to corals.Carbonic anhydrases (CAs), which are...[Show more]

dc.contributor.authorLin, Mei-Fang
dc.contributor.authorMoya, A.
dc.contributor.authorYing, Hua
dc.contributor.authorChen, Chao Lun Allen
dc.contributor.authorCooke, Ira
dc.contributor.authorBall, Eldon
dc.contributor.authorForêt, Sylvain
dc.contributor.authorMiller, David J.
dc.date.accessioned2021-05-07T03:34:21Z
dc.date.available2021-05-07T03:34:21Z
dc.identifier.issn1759-6653
dc.identifier.urihttp://hdl.handle.net/1885/232537
dc.description.abstractCorallimorpharians (coral-like anemones) have a close phylogenetic relationship with scleractinians (hard corals) and can potentially provide novel perspectives on the evolution of biomineralization within the anthozoan subclass Hexacorallia. A survey of the transcriptomes of three representative corallimorpharians led to the identification of homologs of some skeletal organic matrix proteins (SOMPs) previously considered to be restricted to corals.Carbonic anhydrases (CAs), which are ubiquitous proteins involved in CO2 trafficking, are involved in both coral calcification and photosynthesis by endosymbiotic Symbiodinium (zooxanthellae). These multiple roles are assumed to place increased demands on the CA repertoire and have presumably driven the elaboration of the complex CA repertoires typical of corals (note that "corals" are defined here as reef-building Scleractinia). Comparison of the CA inventories of corallimorpharians with those of corals reveals that corals have specifically expanded the secreted and membrane-associated type CAs, whereas similar complexity is observed in the two groups with respect to other CA types.Comparison of the CA complement of the nonsymbiotic corallimorph Corynactis australis with that of Ricordea yuma, a corallimorph which normally hosts Symbiodinium, reveals similar numbers and distribution of CA types and suggests that an expansion of the CA repertoire has been necessary to enable calcification but may not be a requirement to enable symbiosis. Consistent with this idea, preliminary analysis suggests that the CA complexity of zooxanthellate and nonzooxanthellate sea anemones is similar.The comparisons above suggest that although there are relatively few new genes in the skeletal organic matrix of corals (which controls the skeleton deposition process), the evolution of calcification required an expanded repertoire of secreted and membrane-associated CAs.
dc.description.sponsorshipThe authors gratefully acknowledge the ReFuGe2020 Consortium for access to Porites lutea genomic data and the ARC Centre of Excellence for Coral Reef Studies for funding support. C.A.C. is grateful for the support of Academia Sinica and the Ministry of Science, Taiwan. M.-F.L. also thanks James Cook University for the award of a Postgraduate Research Scholarship
dc.format.mimetypeapplication/pdf
dc.language.isoen_AU
dc.publisherOxford University Press
dc.rights© The Author(s) 2017. Published by Oxford University Press on behalf of the Society for Molecular Biology and Evolution.
dc.rights.urihttp://creativecommons.org/licenses/by-nc/4.0/
dc.sourceGenome Biology and Evolution
dc.subjectcorallimorpharian
dc.subjectcoral calcification
dc.subjectcarbonic anhydrase
dc.subjectmolecular evolution
dc.subjectskeletal organic matrix proteins
dc.titleAnalyses of corallimorpharian transcriptomes provide new perspectives on the evolution of calcification in the scleractinia (corals)
dc.typeJournal article
local.description.notesImported from ARIES
local.identifier.citationvolume9
dc.date.issued2017
local.identifier.absfor060309 - Phylogeny and Comparative Analysis
local.identifier.absfor060399 - Evolutionary Biology not elsewhere classified
local.identifier.ariespublicationa383154xPUB5641
local.publisher.urlhttp://gbe.oxfordjournals.org/
local.type.statusPublished Version
local.contributor.affiliationLin, Mei-Fang, James Cook University
local.contributor.affiliationMoya, A., James Cook University
local.contributor.affiliationYing, Hua, College of Science, ANU
local.contributor.affiliationChen, Chao Lun Allen, Biodiversity Research Center
local.contributor.affiliationCooke, Ira, James Cook University
local.contributor.affiliationBall, Eldon, College of Science, ANU
local.contributor.affiliationForet, Sylvain, College of Science, ANU
local.contributor.affiliationMiller, David J., James Cook University
local.bibliographicCitation.issue1
local.bibliographicCitation.startpage150
local.bibliographicCitation.lastpage160
local.identifier.doi10.1093/gbe/evw297
local.identifier.absseo970106 - Expanding Knowledge in the Biological Sciences
dc.date.updated2020-11-23T10:11:18Z
local.identifier.scopusID2-s2.0-85016243847
local.identifier.thomsonID000396057400013
dcterms.accessRightsOpen Access
dc.provenanceThis is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com
dc.rights.licenseCreative Commons Attribution Non-Commercial License
CollectionsANU Research Publications

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