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Genomic analysis of phylogenetic group B2 extraintestinal pathogenic E. coli causing infections in dogs in Australia

Kidsley, Amanda K.; O'Dea, Mark; Saputra, Sugiyono; Jordan, David; Johnson, James R.; Gordon, David; Turni, Conny; Djordjevic, Steven; Abraham, Sam; Trott, Darren


This study investigated the prevalence of extraintestinal pathogenic E. coli (ExPEC)-associated sequence types (STs) from phylogenetic group B2 among 449 fluoroquinolone-susceptible dog clinical isolates from Australia. Isolates underwent PCR-based phylotyping and random amplified polymorphic DNA analysis to determine clonal relatedness. Of the 317 so-identified group B2 isolates, 77 underwent whole genome sequencing (WGS), whereas the remainder underwent PCR-based screening for ST complexes...[Show more]

CollectionsANU Research Publications
Date published: 2020
Type: Journal article
Source: Veterinary Microbiology: an International journal
DOI: 10.1016/j.vetmic.2020.108783


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