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A new phylogenetic protocol: dealing with model misspecification and confirmation bias in molecular phylogenetics

Jermiin, Lars; Catullo, Renee; Holland, B.

Description

Molecular phylogenetics plays a key role in comparative genomics and has increasingly significant impacts on science, industry, government, public health and society. In this paper, we posit that the current phylogenetic protocol is missing two critical steps, and that their absence allows model misspecification and confirmation bias to unduly influence phylogenetic estimates. Based on the potential offered by well-established but under-used procedures, such as assessment of phylogenetic...[Show more]

CollectionsANU Research Publications
Date published: 2020
Type: Journal article
URI: http://hdl.handle.net/1885/216800
Source: NAR Genomics and Bioinformatics
DOI: 10.1093/nargab/lqaa041
Access Rights: Open Access

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