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Predicting dark respiration rates of wheat leaves from hyperspectral reflectance

Coast, Onoriode; Shah, Shahen; Ivakov, Alexander; Gaju, Oorbessy; Wilson, Pip; Posch, Bradley; Bryant, Callum; Negrini, Ana; Evans, John; Condon, Anthony; Silva-Pérez, Viridiana; Reynolds, Matthew P.; Pogson, Barry; Millar, A Harvey; Furbank, Robert; Atkin, Owen

Description

Greater availability of leaf dark respiration (Rdark) data could facilitate breeding efforts to raise crop yield and improve global carbon cycle modelling. However, the availability of Rdark data is limited because it is cumbersome, time consuming, or destructive to measure. We report a non‐destructive and high‐throughput method of estimating Rdark from leaf hyperspectral reflectance data that was derived from leaf Rdark measured by a destructive high‐throughput oxygen consumption technique. We...[Show more]

dc.contributor.authorCoast, Onoriode
dc.contributor.authorShah, Shahen
dc.contributor.authorIvakov, Alexander
dc.contributor.authorGaju, Oorbessy
dc.contributor.authorWilson, Pip
dc.contributor.authorPosch, Bradley
dc.contributor.authorBryant, Callum
dc.contributor.authorNegrini, Ana
dc.contributor.authorEvans, John
dc.contributor.authorCondon, Anthony
dc.contributor.authorSilva-Pérez, Viridiana
dc.contributor.authorReynolds, Matthew P.
dc.contributor.authorPogson, Barry
dc.contributor.authorMillar, A Harvey
dc.contributor.authorFurbank, Robert
dc.contributor.authorAtkin, Owen
dc.date.accessioned2020-02-28T03:02:13Z
dc.identifier.issn0140-7791
dc.identifier.urihttp://hdl.handle.net/1885/201959
dc.description.abstractGreater availability of leaf dark respiration (Rdark) data could facilitate breeding efforts to raise crop yield and improve global carbon cycle modelling. However, the availability of Rdark data is limited because it is cumbersome, time consuming, or destructive to measure. We report a non‐destructive and high‐throughput method of estimating Rdark from leaf hyperspectral reflectance data that was derived from leaf Rdark measured by a destructive high‐throughput oxygen consumption technique. We generated a large dataset of leaf Rdark for wheat (1380 samples) from 90 genotypes, multiple growth stages, and growth conditions to generate models for Rdark. Leaf Rdark (per unit leaf area, fresh mass, dry mass or nitrogen, N) varied 7‐ to 15‐fold among individual plants, whereas traits known to scale with Rdark, leaf N, and leaf mass per area (LMA) only varied twofold to fivefold. Our models predicted leaf Rdark, N, and LMA with r2 values of 0.50–0.63, 0.91, and 0.75, respectively, and relative bias of 17–18% for Rdark and 7–12% for N and LMA. Our results suggest that hyperspectral model prediction of wheat leaf Rdark is largely independent of leaf N and LMA. Potential drivers of hyperspectral signatures of Rdark are discussed.
dc.description.sponsorshipThis work was supported by grants from the ARC Centre of Excellence in Plant Energy Biology (CE140100008), the ARC Centre of Excellence for Translational Photosynthesis (CE1401000015), the Australian Government National Collaborative Research Infrastructure Strategy (Australian Plant Phenomics Facility) – PIEPS grant, the International Wheat Yield Partnership and Grains Research Development Council Grant (ANU00027). We acknowledge the Endeavour Fellowship awarded to S.S. for which part of this research was developed.
dc.format.mimetypeapplication/pdf
dc.language.isoen_AU
dc.publisherWiley
dc.rights© 2019 John Wiley & Sons Ltd
dc.sourcePlant Cell and Environment
dc.titlePredicting dark respiration rates of wheat leaves from hyperspectral reflectance
dc.typeJournal article
local.description.notesImported from ARIES
local.identifier.citationvolume42
dc.date.issued2019
local.identifier.absfor070303 - Crop and Pasture Biochemistry and Physiology
local.identifier.absfor070302 - Agronomy
local.identifier.ariespublicationu3102795xPUB3281
local.publisher.urlhttps://www.wiley.com/en-gb
local.type.statusAccepted Version
local.contributor.affiliationCoast, Onoriode, College of Science, ANU
local.contributor.affiliationShah, Shahen, College of Science, ANU
local.contributor.affiliationIvakov, Alexander, College of Science, ANU
local.contributor.affiliationGaju, Oorbessy, College of Science, ANU
local.contributor.affiliationWilson, Philippa, College of Science, ANU
local.contributor.affiliationPosch, Bradley, College of Science, ANU
local.contributor.affiliationBryant, Callum, College of Science, ANU
local.contributor.affiliationNegrini, Ana, College of Science, ANU
local.contributor.affiliationEvans, John, College of Science, ANU
local.contributor.affiliationCondon, Anthony, College of Science, ANU
local.contributor.affiliationSilva-Perez, Viridiana, College of Science, ANU
local.contributor.affiliationReynolds, Matthew P., International Maize and Wheat Improvement Center (CIMMYT)
local.contributor.affiliationPogson, Barry, College of Science, ANU
local.contributor.affiliationMillar, A Harvey , University of Western Australia
local.contributor.affiliationFurbank, Robert, College of Science, ANU
local.contributor.affiliationAtkin, Owen, College of Science, ANU
dc.relationhttp://purl.org/au-research/grants/arc/CE1401000015
dc.relationhttp://purl.org/au-research/grants/arc/CE140100008
local.bibliographicCitation.issue7
local.bibliographicCitation.startpage2133
local.bibliographicCitation.lastpage2150
local.identifier.doi10.1111/pce.13544
local.identifier.absseo820507 - Wheat
dc.date.updated2019-11-25T07:37:36Z
local.identifier.scopusID2-s2.0-85063583746
dcterms.accessRightsOpen Access
dc.provenancehttp://sherpa.ac.uk/romeo/issn/0140-7791/..."author can archive post-print (ie final draft post-refereeing). 12 months embargo" from SHERPA/RoMEO site (as at 03/03/2020). This is the peer reviewed version of the following article: [Coast, Onoriode, et al. "Predicting dark respiration rates of wheat leaves from hyperspectral reflectance." Plant, cell & environment 42.7 (2019): 2133-2150.], which has been published in final form at [https://dx.doi.org/10.1111/pce.13544]. This article may be used for non-commercial purposes in accordance with Wiley Terms and Conditions for Use of Self-Archived Versions.
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