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Bioinformatic analysis of the CLE signaling peptide family

Oelkers, Karsten; Goffard, Nicolas; Weiller, Georg; Gresshoff, Peter M; Mathesius, Ulrike; Frickey, Tancred


BACKGROUND: Plants encode a large number of leucine-rich repeat receptor-like kinases. Legumes encode several LRR-RLK linked to the process of root nodule formation, the ligands of which are unknown. To identify ligands for these receptors, we used a combination of profile hidden Markov models and position-specific iterative BLAST, allowing us to detect new members of the CLV3/ESR (CLE) protein family from publicly available sequence databases. RESULTS: We identified 114 new members of the...[Show more]

CollectionsANU Research Publications
Date published: 2008-01-03
Type: Journal article
Source: BMC Plant Biology
DOI: 10.1186/1471-2229-8-1


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